Data Format

Mclumi has a few number of requirements for data taken as input and output. Users can enable the basic use of Mclumi by looking at the input format and output format sections.

Contents:

• Input format
  • BAM file
  • UMI-tools preprocessed BAM file
• Output format
  • 1. Single genomic position/gene/gene-by-cell result format
  • 2. Genomic position result format
  • 3. bulk RNA-seq result format
  • 4. scRNA-seq data format